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For travelers searching for affordable flights from Manila to Tokyo flights, FlightsDaddy offers the best deals to suit your travel needs. Whether you’re heading to Japan for business, leisure or a cultural adventure, finding the right airfare is essential. The Manila (MNL) to Tokyo (NRT/HND) route is served by top airlines such as Philippine Airlines, Japan Airlines, All Nippon Airways (ANA), and Cebu Pacific, offering both direct & connecting flights. Booking with FlightsDaddy allows you to access exclusive promotions and discounted fares that may be available only online.
This month discounted airfare from Manila to Tokyo flights Book online
| Departure at | Return at | Airline | Flight number | Airline | Flight | Stops | Price | Find tickets |
|---|---|---|---|---|---|---|---|---|
| 1 April 2026 | 8 April 2026 | Cebu Pacific | 5J 828 | Cebu Pacific (5J 828) | 1 Stop | 594 | Tickets from 594 | |
| 4 April 2026 | 29 May 2026 | Philippine Airlines | PR 424 | Philippine Airlines (PR 424) | Direct | 505 | Tickets from 505 | |
| 5 April 2026 | 9 April 2026 | Eva Air | BR 278 | Eva Air (BR 278) | 1 Stop | 473 | Tickets from 473 | |
| 7 April 2026 | 23 April 2026 | Eva Air | BR 262 | Eva Air (BR 262) | 1 Stop | 404 | Tickets from 404 | |
| 10 April 2026 | 22 April 2026 | Eva Air | BR 278 | Eva Air (BR 278) | 1 Stop | 481 | Tickets from 481 | |
| 11 April 2026 | 23 April 2026 | Eva Air | BR 262 | Eva Air (BR 262) | 1 Stop | 404 | Tickets from 404 | |
| 12 April 2026 | 22 April 2026 | Eva Air | BR 278 | Eva Air (BR 278) | 1 Stop | 492 | Tickets from 492 | |
| 20 April 2026 | 26 April 2026 | Cebu Pacific | 5J 5054 | Cebu Pacific (5J 5054) | Direct | 461 | Tickets from 461 | |
| 22 April 2026 | 29 April 2026 | Vietnam Airlines | VN 649 | Vietnam Airlines (VN 649) | 1 Stop | 435 | Tickets from 435 | |
| 7 May 2026 | 28 May 2026 | Cebu Pacific | 5J 5054 | Cebu Pacific (5J 5054) | Direct | 361 | Tickets from 361 | |
| 10 May 2026 | 23 May 2026 | Philippines AirAsia | Z2 190 | Philippines AirAsia (Z2 190) | Direct | 291 | Tickets from 291 | |
| 14 May 2026 | 29 May 2026 | Philippines AirAsia | Z2 190 | Philippines AirAsia (Z2 190) | Direct | 267 | Tickets from 267 | |
| 20 May 2026 | 23 May 2026 | Philippines AirAsia | Z2 190 | Philippines AirAsia (Z2 190) | Direct | 217 | Tickets from 217 | |
| 9 June 2026 | 15 June 2026 | Philippines AirAsia | Z2 190 | Philippines AirAsia (Z2 190) | Direct | 182 | Tickets from 182 | |
| 14 August 2026 | 10 September 2026 | Cebu Pacific | 5J 5054 | Cebu Pacific (5J 5054) | Direct | 178 | Tickets from 178 | |
| 20 August 2026 | 26 August 2026 | Philippines AirAsia | Z2 190 | Philippines AirAsia (Z2 190) | Direct | 215 | Tickets from 215 | |
| 23 August 2026 | 5 September 2026 | Philippines AirAsia | Z2 190 | Philippines AirAsia (Z2 190) | Direct | 163 | Tickets from 163 | |
| 11 October 2026 | 18 October 2026 | Cebu Pacific | 5J 5054 | Cebu Pacific (5J 5054) | Direct | 162 | Tickets from 162 | |
| 31 October 2026 | 2 November 2026 | Philippine Airlines | PR 424 | Philippine Airlines (PR 424) | Direct | 262 | Tickets from 262 | |
| 11 November 2026 | 17 November 2026 | Cebu Pacific | 5J 5054 | Cebu Pacific (5J 5054) | Direct | 207 | Tickets from 207 | |
| 22 December 2026 | 1 January 2027 | Cebu Pacific | 5J 5056 | Cebu Pacific (5J 5056) | 1 Stop | 369 | Tickets from 369 | |
| 23 December 2026 | 1 January 2027 | China Southern Airlines | CZ 398 | China Southern Airlines (CZ 398) | 1 Stop | 378 | Tickets from 378 | |
| 24 December 2026 | 2 January 2027 | Cebu Pacific | 5J 573 | Cebu Pacific (5J 573) | 1 Stop | 377 | Tickets from 377 | |
| 25 December 2026 | 2 January 2027 | Cebu Pacific | 5J 5056 | Cebu Pacific (5J 5056) | 1 Stop | 390 | Tickets from 390 | |
| 30 January 2027 | 5 February 2027 | Cebu Pacific | 5J 5056 | Cebu Pacific (5J 5056) | Direct | 165 | Tickets from 165 |
Book Direct Flights from Manila to Tokyo
| Departure at | Return at | Airline | Find tickets |
|---|---|---|---|
| 11 April 2026 | 23 April 2026 | Tickets from 441 | |
| 20 May 2026 | 23 May 2026 | Tickets from 217 | |
| 9 June 2026 | 15 June 2026 | Tickets from 182 |
Cheap flights from Manila
| Destination | Departure at | Return at | Find tickets |
|---|---|---|---|
| Cebu City | 5 September 2026 | 26 September 2026 | Tickets from 38 |
| Roxas City | 8 July 2026 | 18 July 2026 | Tickets from 40 |
| Iloilo | 1 August 2026 | 9 August 2026 | Tickets from 41 |
| Puerto Princesa | 3 November 2026 | 10 November 2026 | Tickets from 41 |
| Kalibo | 29 November 2026 | 18 December 2026 | Tickets from 42 |
| Caticlan | 30 November 2026 | 11 December 2026 | Tickets from 44 |
| Tagbilaran | 1 August 2026 | 4 August 2026 | Tickets from 55 |
| Davao | 12 August 2026 | 16 August 2026 | Tickets from 60 |
| Cagayan De Oro | 10 June 2026 | 15 July 2026 | Tickets from 61 |
| Legaspi | 8 June 2026 | 10 June 2026 | Tickets from 70 |
| Bacolod | 19 June 2026 | 22 June 2026 | Tickets from 71 |
| Dumaguete | 11 March 2027 | 15 March 2027 | Tickets from 72 |
| Cauayan | 10 June 2026 | 10 July 2026 | Tickets from 74 |
| Macau | 11 August 2026 | 14 August 2026 | Tickets from 87 |
| Zamboanga | 28 December 2026 | 5 January 2027 | Tickets from 98 |
| Surigao | 1 September 2026 | 7 September 2026 | Tickets from 98 |
| Sayak (Siargao) | 9 July 2026 | 13 July 2026 | Tickets from 100 |
| Taipei | 3 August 2026 | 6 August 2026 | Tickets from 101 |
| Hong Kong | 9 December 2026 | 14 December 2026 | Tickets from 105 |
| Busuanga | 9 October 2026 | 16 October 2026 | Tickets from 110 |
| Bangkok | 11 October 2026 | 15 October 2026 | Tickets from 123 |
| Kuala Lumpur | 6 November 2026 | 11 November 2026 | Tickets from 124 |
| Tacloban | 29 May 2026 | 1 June 2026 | Tickets from 126 |
| El Nido | 18 September 2026 | 3 October 2026 | Tickets from 128 |
| Da Nang | 21 July 2026 | 25 July 2026 | Tickets from 130 |
| Singapore | 1 August 2026 | 5 August 2026 | Tickets from 132 |
| General Santos City | 26 May 2026 | 6 June 2026 | Tickets from 137 |
| Ozamis City | 5 May 2026 | 11 May 2026 | Tickets from 146 |
| Jakarta | 25 July 2026 | 13 August 2026 | Tickets from 155 |
| Cotabato | 23 April 2026 | 12 June 2026 | Tickets from 156 |
| Virac | 12 June 2026 | 14 June 2026 | Tickets from 157 |
| Ho Chi Minh City | 25 September 2026 | 12 October 2026 | Tickets from 162 |
| Tokyo | 11 October 2026 | 18 October 2026 | Tickets from 162 |
| Nanjing | 5 May 2026 | 18 May 2026 | Tickets from 172 |
| Camiguin | 12 June 2026 | 14 June 2026 | Tickets from 182 |
| Hanoi | 22 July 2026 | 26 July 2026 | Tickets from 182 |
| Denpasar (Bali) | 28 August 2026 | 2 September 2026 | Tickets from 182 |
| Seoul | 29 May 2026 | 1 June 2026 | Tickets from 193 |
| Beijing | 14 April 2026 | 20 April 2026 | Tickets from 208 |
| Shanghai | 2 September 2026 | 4 September 2026 | Tickets from 210 |
| Guangzhou | 9 June 2026 | 14 June 2026 | Tickets from 216 |
| Harbin | 24 May 2026 | 25 June 2026 | Tickets from 252 |
| Haikou | 22 April 2026 | 5 May 2026 | Tickets from 255 |
| Nha Trang | 14 August 2026 | 31 August 2026 | Tickets from 256 |
| Fukuoka | 30 November 2026 | 7 December 2026 | Tickets from 258 |
| Chiang Mai | 25 October 2026 | 31 October 2026 | Tickets from 263 |
| Bandar Seri Begawan | 25 April 2026 | 28 April 2026 | Tickets from 265 |
| Krabi | 30 June 2026 | 31 July 2026 | Tickets from 268 |
| Phuket | 19 April 2026 | 21 April 2026 | Tickets from 279 |
| Busan | 5 April 2026 | 20 April 2026 | Tickets from 296 |
| Sanya | 25 April 2026 | 4 May 2026 | Tickets from 300 |
| Phnom Penh (Ta Khmau) | 14 June 2026 | 20 June 2026 | Tickets from 304 |
| Chengdu | 22 April 2026 | 5 May 2026 | Tickets from 316 |
| Jeju | 11 November 2026 | 17 November 2026 | Tickets from 322 |
| Phu Quoc | 8 April 2026 | 15 April 2026 | Tickets from 328 |
| Vientiane | 14 June 2026 | 20 June 2026 | Tickets from 329 |
| Delhi | 5 July 2026 | 22 August 2026 | Tickets from 345 |
| Melbourne | 31 May 2026 | 24 July 2026 | Tickets from 396 |
| Basco | 3 August 2026 | 9 August 2026 | Tickets from 399 |
| Guam | 27 November 2026 | 1 December 2026 | Tickets from 420 |
| Jaipur | 26 August 2026 | 30 September 2026 | Tickets from 420 |
| Praya | 3 April 2026 | 12 April 2026 | Tickets from 423 |
| Shenzhen | 22 April 2026 | 5 May 2026 | Tickets from 434 |
| Ujung Pandang | 19 August 2026 | 21 August 2026 | Tickets from 438 |
| Dubai | 8 June 2026 | 28 June 2026 | Tickets from 441 |
| Sydney | 27 November 2026 | 1 December 2026 | Tickets from 449 |
| Colombo | 3 June 2026 | 10 June 2026 | Tickets from 483 |
| Almaty | 1 July 2026 | 30 July 2026 | Tickets from 507 |
| Dhaka | 21 July 2026 | 25 July 2026 | Tickets from 513 |
| Male | 6 June 2026 | 28 June 2026 | Tickets from 528 |
| Port Moresby | 4 September 2026 | 22 September 2026 | Tickets from 532 |
| Ulaanbaatar | 15 October 2026 | 19 October 2026 | Tickets from 535 |
| Heihe | 27 April 2026 | 10 May 2026 | Tickets from 549 |
| Naga | 26 April 2026 | 3 May 2026 | Tickets from 555 |
| Istanbul | 1 May 2026 | 1 June 2026 | Tickets from 555 |
| Rome | 31 May 2026 | 8 June 2026 | Tickets from 570 |
| Moscow | 5 June 2026 | 14 June 2026 | Tickets from 573 |
| Milan | 31 May 2026 | 8 June 2026 | Tickets from 575 |
| Munich | 23 May 2026 | 3 June 2026 | Tickets from 576 |
| Amritsar | 19 December 2026 | 8 January 2027 | Tickets from 578 |
| Vladivostok | 7 May 2026 | 28 May 2026 | Tickets from 581 |
| Riyadh | 30 April 2026 | 1 May 2026 | Tickets from 637 |
| Koror | 12 April 2026 | 15 April 2026 | Tickets from 639 |
| Tashkent | 20 August 2026 | 24 August 2026 | Tickets from 652 |
| Doha | 19 August 2026 | 26 August 2026 | Tickets from 663 |
| Sharjah | 10 June 2026 | 10 July 2026 | Tickets from 663 |
| Kathmandu | 11 April 2026 | 18 April 2026 | Tickets from 666 |
| Barcelona | 8 April 2026 | 22 April 2026 | Tickets from 685 |
| Cheongju | 31 March 2026 | 2 April 2026 | Tickets from 688 |
| San Francisco | 31 August 2026 | 30 September 2026 | Tickets from 693 |
| Los Angeles | 7 June 2026 | 11 July 2026 | Tickets from 693 |
| Honolulu | 5 September 2026 | 13 September 2026 | Tickets from 738 |
| Khabarovsk | 8 August 2026 | 22 August 2026 | Tickets from 752 |
| Mount Hagen | 5 June 2026 | 11 June 2026 | Tickets from 776 |
| Astana | 6 June 2026 | 4 August 2026 | Tickets from 779 |
| Seattle | 20 May 2026 | 24 June 2026 | Tickets from 806 |
| London | 24 April 2026 | 9 May 2026 | Tickets from 829 |
| Casablanca | 11 May 2026 | 16 May 2026 | Tickets from 830 |
| Jeddah | 1 April 2026 | 26 April 2026 | Tickets from 840 |
| Auckland | 5 May 2026 | 12 May 2026 | Tickets from 851 |

Save up to 40% Call Us at +1-812-221-1788
By calling FlightsDaddy customer service at +1-812-221-1788, you can receive expert guidance on booking the most cost-effective and convenient flights for Manila to Tokyo flights. The dedicated support team assists with flight reservations, baggage policies, schedule inquiries and any special travel requests. Whether you need last-minute Manila to Tokyo bookings, flexible date options, or exclusive discounts, their agents provide personalized assistance tailored to your budget and preferences.
